Neural network based on autocatalytic reaction performs image classification

Researchers in the US have combined an autocatalytic click reaction with automated liquid handling and UV-Vis spectroscopy to create a simple neural network that can classify binary images. Chemical computing takes inspiration from the complexity and efficiency of living systems…

Researchers in the US have combined an autocatalytic click reaction with automated liquid handling and UV-Vis spectroscopy to create a simple neural network that can classify binary images.

Chemical computing takes inspiration from the complexity and efficiency of living systems and aims to develop chemical counterparts that can perform functions such as information processing and storage. To date, DNA has been the molecule of choice for studies in this area. But simple chemical systems based on small molecules, which can tolerate a wider range of reaction conditions and require fewer components, are starting to open up new avenues in chemical computing. Source: © Jacob Rosenstein/Brown UniversityAn overview of the copper catalysed azide–alkyne cycloaddition reaction, showing the buildup of triazole branches on the amine backbone of (A) after each azide (B) incorporation. The branched product (D) catalyses its own generation by promoting the reduction of Cu(II) Autocatalytic reactions share a key feature — they are catalysed by their reaction product. As a result, the reaction rate is linked to the amount of product present, which also means that autocatalytic reactions display a non-linear response when it comes to product formation over time. The kinetic models used to describe these reactions have mathematical forms that resemble activation functions used in artificial neural networks. This similarity inspired a team of scientists from Brown University, led by Jacob Rosenstein, to build a winner-take-all neural network using an autocatalytic reaction. The researchers used an established copper-catalysed cycloaddition reaction between 2-azidoethanol and tripropargylamine. This click reaction produces tris(triazolylmethyl)amine, which increases both the production and activity of Cu(I), resulting in autocatalysis. A key advantage of this work is that ‘the click reaction is really robust’ and can tolerate different conditions, comments Ekaterina Skorb, an infochemistry researcher from ITMO University in Russia. ‘It’s a really simple reaction and [has] clear rules on how we can use it, and what is input and output.’ In a winner-take-all neural network, potential classes race between each other and the class that reaches a specific condition first is deemed the winner. In this case, the researchers used the reaction halfway point (transition time, t1/2), which could be programmed by tuning the initial concentration of tris(triazolylmethyl)amine, as the condition for image classification. During training, the network weights were tuned so that the class reaching the t1/2 first represented the image class most similar to image input. Source: © Jacob Rosenstein/Brown UniversityTop: Image of the data plate, containing a binary image of a starfish represented in the presence (blue) or absence (transparent) of pre-reacted catalyst in solvent filled wells. Bottom: Example images from each of the considered classes To implement the winner-take-all network chemically, the team encoded binary 16×16-pixel image on a well plate, using the initial concentration of tris(triazolylmethyl) to specify pixel color, with one position representing one pixel. Next, the researchers used a robotic fluid handler to remove a certain volume, dependent on weights determined through network training, from each well. The samples were added together into individual pools for each potential image class and mixed with fresh reagents. Finally, the pool that reached the transition time first was classed as the winner, identifying the image class. Click reactions will likely be familiar to many researchers. But Skorb says this work is important because it ‘gives new insights into how people can use it for computer science’. Rosenstein and colleagues anticipate that autocatalytic reaction networks will play a significant role in new chemical computing systems. With a view to the future, Skorb remarks that ‘it would be really great if we can find a way to combine chemical systems and biological systems,’ adding that since click chemistry works in water, it could be combined with a more sophisticated chemical computer to make an artificial brain. ReferencesThis article is open access C Arcadia et al, Chem. Sci., 2021, DOI: 10.1039/d0sc05860b Related articlesResearchAutocatalytic process sees amine droplet degrade bulk polymer2020-04-03T08:32:00ZRare example of a tiny local stimulation generating a macroscopic breakdownOpinionChemical computers question the logic of life2019-09-18T09:30:00ZCircuits of chemicals could carry out calculationsResearchLeap forward for molecular computing as DNA executes six-bit algorithms2019-03-20T18:00:00ZComputer made from DNA strands can recognise palindromes, copy and sort data, and perform random walks More NewsResearchTandem catalysis and smart design offer new route to polypropylene plastic2021-03-19T10:09:00ZSelective combustion of hydrogen by-product improves oxidative propane dehydrogenation yieldsNewsUniversity of California and Elsevier finally reach open access deal2021-03-18T14:30:00ZAfter walking away two years ago, the university secures open access for it researchers on the condition they chip in for publishing costsResearchMolecular pendulum sensors could track and monitor disease2021-03-18T10:33:00ZDNA–antibody probes can detect specific proteins inside a live subject SubscribeAdvertiseTopicsIssuesContributors Our mission News and events Campaigns Awards and funding Global challenges Support our work © Royal Society of Chemistry Registered charity number: 207890 Site powered by Webvision Cloud